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Arbor G Dykema 1, Boyang Zhang 2, Bezawit A Woldemeskel 3, Caroline C Garliss 3, Rufiaat Rashid 1, Timothy Westlake 1, Li Zhang 1, Jiajia Zhang 1, Laurene S Cheung 1, Justina X Caushi 1, Drew M Pardoll 1, Andrea L Cox 4, Hongkai Ji 2, Kellie N Smith 5, Joel N Blankson 6; 1 Bloomberg∼Kimmel Institute for Cancer Immunotherapy, Johns Hopkins University, Baltimore, MD, USA; Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University, Baltimore, MD, USA. 2 Department of Biostatistics, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, MD, USA. 3 Department of Medicine, School of Medicine, Johns Hopkins University, Baltimore, MD, USA. 4 Bloomberg∼Kimmel Institute for Cancer Immunotherapy, Johns Hopkins University, Baltimore, MD, USA; Department of Medicine, School of Medicine, Johns Hopkins University, Baltimore, MD, USA. 5 Bloomberg∼Kimmel Institute for Cancer Immunotherapy, Johns Hopkins University, Baltimore, MD, USA; Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University, Baltimore, MD, USA. Electronic address: ksmit228@jhmi.edu. 6 Department of Medicine, School of Medicine, Johns Hopkins University, Baltimore, MD, USA. Electronic address: jblanks@jhmi.edu.
Mark N Stein 1, Lawrence Fong 2, Ronald Tutrone 3, Anthony Mega 4, Elaine T Lam 5, Megan Parsi 6, Surya Vangala 6, Andres A Gutierrez 6, Naomi B Haas 7; 1 Columbia University Medical Center, New York, NY, USA. 2 University of California, San Francisco, CA, USA. 3 Chesapeake Urology Research Associates, Towson, MD, USA. 4 Lifespan Oncology Clinical Research, Rhode Island Hospital, Providence, RI, USA. 5 University of Colorado Cancer Center, University of Colorado Anschutz Medical Center, Aurora, CO, USA. 6 Advaxis, Monmouth Junction, NJ, USA. 7 Abramson Cancer Center, University of Pennsylvania, Philadelphia, PA, USA.
Kimberly A Burton 1,2,3,4, Elisabeth Mahen 2,5,6, Eric Quentin Konnick 7, Sibel Blau 2,3, Michael O Dorschner 8,9,10, Arturo B Ramirez 11, Stephen C Schmechel 8, Chaozhong Song 2,5,6, Rahul Parulkar 12, Stephanie Parker 3,4, Francis Mark Senecal 3,4, Colin C Pritchard 7, Brigham H Mecham 13, Christopher Szeto 12, Patricia Spilman 14, Jingchun Zhu 15, Vijayakrishna K Gadi 16,17, Roy Ronen 18, Jackie Stilwell 11, Eric Kaldjian 11, Janusz Dutkowski 18, Stephen Charles Benz 12, Shahrooz Rabizadeh 14, Patrick Soon-Shiong 12,14, C Anthony Blau 2,5,6,19; 1 Department of Medicine, University of Washington, Seattle, WA. 2 Center for Cancer Innovation, University of Washington, Seattle, WA. 3 Northwest Medical Specialties, Puyallup and Tacoma, WA. 4 South Sound CARE Foundation, Seattle, WA. 5 Institute for Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA. 6 Department of Medicine/Hematology, University of Washington, Seattle, WA. 7 Department of Laboratory Medicine, University of Washington, Seattle, WA. 8 Department of Laboratory Medicine and Pathology, University of Washington, Seattle, WA. 9 Department of Psychiatry and Behavioral Sciences, University of Washington, Seattle, WA. 10 Center for Precision Diagnostics, University of Washington, Seattle, WA. 11 Rarecyte Inc, Seattle, WA. 12 NantHealth, Culver City, CA. 13 Trialomics, Seattle, WA. 14 ImmunityBio Inc, Culver City, CA. 15 Computational Genomics Lab, University of California at Santa Cruz, Santa Cruz, CA. 16 Department of Medicine, University of Illinois, Chicago, IL. 17 Fred Hutchinson Cancer Research Center, Seattle, WA. 18 Data4Cure Inc, La Jolla, CA. 19 All4Cure Inc, Seattle, WA.
Santosha Vardhana 1,2,3, Lance Baldo 4, William G Morice 2nd 5, E John Wherry 6,7,8; 1 Lymphoma Service, Division of Hematologic Malignancies, Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA. 2 Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA. 3 Parker Institute for Cancer Immunotherapy, Memorial Sloan Kettering Cancer Center, New York, New York, USA. 4 Adaptive Biotechnologies, Seattle, Washington, USA. 5 Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA. 6 Department of Systems Pharmacology & Translational Therapeutics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA. 7 Institute for Immunology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA. 8 Parker Institute for Cancer Immunotherapy, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Jing Li 1, Maxim Zaslavsky 2, Yapeng Su 3, Jing Guo 4, Michael J Sikora 5, Vincent van Unen 1, Asbjørn Christophersen 6,7,8, Shin-Heng Chiou 1, Liang Chen 1, Jiefu Li 9, Xuhuai Ji 10, Julie Wilhelmy 1, Alana M McSween 1, Brad A Palanski 11, Venkata Vamsee Aditya Mallajosyula 1, Nathan A Bracey 1, Gopal Krishna R Dhondalay 12, Kartik Bhamidipati 13, Joy Pai 13, Lucas B Kipp 14, Jeffrey E Dunn 14, Stephen L Hauser 15, Jorge R Oksenberg 15, Ansuman T Satpathy 16, William H Robinson 17,18, Cornelia L Dekker 19, Lars M Steinmetz 5,20,21, Chaitan Khosla 11,22,23, Paul J Utz 1,18, Ludvig M Sollid 6,7,8,24, Yueh-Hsiu Chien 1,4, James R Heath 3,25, Nielsen Q Fernandez-Becker 26, Kari C Nadeau 1 12, Naresha Saligrama 1, Mark M Davis 1,9,4; 1 Institute of Immunity, Transplantation and Infection, Stanford University School of Medicine, Stanford, CA, USA. 2 Program in Computer Science, Stanford University, Stanford, CA, USA. 3 Institute for Systems Biology, Seattle, WA, USA. 4 Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, USA. 5 Department of Genetics, Stanford University School of Medicine, Stanford, CA, USA. 6 K.G. Jebsen Coeliac Disease Research Centre, University of Oslo, Oslo, Norway. 7 Institute of Clinical Medicine, University of Oslo, Oslo, Norway. 8 Department of Immunology, University of Oslo, Oslo, Norway. 9 The Howard Hughes Medical Institute, Stanford University School of Medicine, Stanford, CA, USA. 10 Human Immune Monitoring Center, Stanford University School of Medicine, Stanford, CA, USA. 11 Department of Chemistry, Stanford University, Stanford, CA, USA. 12 Sean N. Parker Center for Allergy and Asthma Research, Department of Medicine, Stanford University, Stanford, CA, USA. 13 Program in Immunology, Stanford University School of Medicine, Stanford, CA, USA. 14 Division of Neuroimmunology, Department of Neurology and Neurological Sciences, Stanford University School of Medicine, Stanford, CA, USA. 15 Department of Neurology and UCSF Weill Institute for Neurosciences, University of California, San Francisco, CA, USA. 16 Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA. 17 VA Palo Alto Health Care System, Palo Alto, CA, USA. 18 Division of Immunology and Rheumatology, Department of Medicine, Stanford University, Stanford, CA, USA. 19 Department of Pediatrics, Stanford University School of Medicine, Stanford, CA, USA. 20 Stanford Genome Technology Center, Stanford University, Palo Alto, CA, USA. 21 European Molecular Biology Laboratory (EMBL), Genome Biology Unit, Heidelberg, Germany. 22 Department of Chemical Engineering, Stanford University, Stanford, CA, USA. 23 Stanford ChEM-H, Stanford University, Stanford, CA, USA. 24 Department of Immunology, Oslo University Hospital, Oslo, Norway. 25 Department of Bioengineering, University of Washington, Seattle, WA, USA. 26 Division of Gastroenterology and Hepatology, Department of Medicine, Stanford University, Stanford, CA, USA.
Heikkilä N, et al.
European Journal of Immunology
May 2022
Nelli Heikkilä 1, Iivo Hetemäki 1, Silja Sormunen 2, Helena Isoniemi 3, Eliisa Kekäläinen 4, Jari Saramäki 2, T Petteri Arstila 1; 1 Translational Immunology Research Program (TRIMM), Research Programs Unit (RPU), Department of Bacteriology and Immunology, Medicum, Faculty of Medicine, University of Helsinki, Helsinki, Finland. 2 Department of Computer Science, Aalto University, Espoo, Finland. 3 Division of Transplantation and Liver Surgery, Helsinki University Central Hospital, Helsinki, Finland. 4 Translational Immunology Research Program (TRIMM), Research Programs Unit (RPU), Department of Bacteriology and Immunology, Medicum, Faculty of Medicine, HUSLAB Clinical Microbiology, University of Helsinki, and Helsinki University Central Hospital, Helsinki, Finland.
Mark E Snyder 1,2,3, Kaveh Moghbeli 1, Anna Bondonese 1, Andrew Craig 1, Iulia Popescu 1, Li Fan 1, Tracy Tabib 1, Robert Lafyatis 1, Kong Chen 1, Humberto E Trejo Bittar 4, Elizabeth Lendermon 1, Joseph Pilewski 1, Bruce Johnson 1, Silpa Kilaru 1, Yingze Zhang 1, Pablo G Sanchez 5, Jonathan K Alder 1, Peter A Sims 6, John F McDyer 1,3; 1 Department of Medicine, University of Pittsburgh, Pittsburgh, PA. 2 Department of Immunology, University of Pittsburgh, Pittsburgh, PA. 3 Starzl Transplantation Institute, University of Pittsburgh, Pittsburgh, PA. 4 Department of Pathology, University of Pittsburgh, Pittsburgh, PA. 5 Department of Surgery, University of Pittsburgh, Pittsburgh, PA. 6 Department of Systems Biology, Columbia University Irving Medical Center, New York, NY.
Lucas C M Arruda 1, Ahmed Gaballa 1, Rui Da Silva Rodrigues 2, Bartek Makower 3, Michael Uhlin 1,2,4; 1 Department of Clinical Science, Intervention and Technology, Karolinska Institute, Stockholm, Sweden. 2 Department of Clinical Immunology and Transfusion Medicine, Karolinska University Hospital, Stockholm, Sweden. 3 Mabtech AB, Nacka Strand, Sweden. 4 Department of Applied Physics, Science for Life Laboratory, Royal Institute of Technology, Stockholm, Sweden.
Ifat Geron #,1,2,3, Angela Maria Savino #,1,2,3, Hila Fishman 1,2,3, Noa Tal 1,2, John Brown 4, Virginia A Turati 4, Chela James 4, Jolanda Sarno 5, Michal Hameiri-Grossman 3, Yu Nee Lee 1,6, Avigail Rein 1,2,3, Hillary Maniriho 1,3, Yehudit Birger 1,2,3, Anna Zemlyansky 3, Inna Muler 2, Kara L Davis 5, Victoria Marcu-Malina 7, Nicole Mattson 8, Oren Parnas 9, Rabea Wagener 10, Ute Fischer 10, João T Barata 11, Catriona H M Jamieson 12, Markus Müschen 8, Chun-Wei Chen 8, Arndt Borkhardt 10, Ilan Richard Kirsch 13, Arnon Nagler 1,14, Tariq Enver 4, Shai Izraeli 15,16,17,18; 1 Felsenstein Medical Research Center and The Molecular Genetics and Biochemistry Department, Sackler Faculty of Medicine, Tel Aviv University, Petach Tikva, Israel. 2 Institute of Pediatric Research, Edmond and Lily Safra Children’s Hospital, Chaim Sheba Medical Center, Tel Hashomer, Israel. 3 The Rina Zaizov Pediatric Hematology and Oncology Division Schneider Children’s Medical Center of Israel, Petach Tikva, Israel. 4 Department of Cancer Biology, UCL Cancer Institute, UCL, London, UK. 5 Department of Pediatrics, Bass Center for Childhood Cancer and Blood Disorders, Stanford University, Stanford, CA, USA. 6 Pediatric Department and the Immunology Service, Jeffrey Modell Foundation Center, Edmond and Lily Safra Children’s Hospital Sheba Medical Center, Tel-Hashomer, Israel. 7 Cytogenetic Unit laboratory of Hematology, Chaim Sheba Medical Center Tel Hashomer, Tel Hashomer, Israel. 8 Department of Systems Biology, City of Hope Comprehensive Cancer Center, Monrovia, CA, USA. 9 The Concern Foundation Laboratories at the Lautenberg Center for immunology and Cancer Research, IMRIC, Hebrew University Faculty of Medicine, Jerusalem, Israel. 10 Department of Pediatric Oncology, Hematology and Clinical Immunology, University Children’s Hospital, Medical Faculty, Heinrich-Heine-University Düsseldorf, Düsseldorf, Germany. 11 Instituto de Medicina Molecular, Faculdade de Medicina, Universidade de Lisboa, Lisboa, Portugal. 12 UC San Diego, Moores Cancer Center, Division of Regenerative Medicine, Department of Medicine and Sanford Stem Cell Clinical Center, Ja Jolla, CA, USA. 13 Adaptive Biotechnologies, Inc., Seattle, WA, USA. 14 Hematology Division BMT and Cord Blood Bank Chaim Sheba Medical Center Tel-Hashomer, Tel-Hashomer, Israel. 15 Felsenstein Medical Research Center and The Molecular Genetics and Biochemistry Department, Sackler Faculty of Medicine, Tel Aviv University, Petach Tikva, Israel. sizraeli@gmail.com. 16 Institute of Pediatric Research, Edmond and Lily Safra Children’s Hospital, Chaim Sheba Medical Center, Tel Hashomer, Israel. sizraeli@gmail.com. 17 The Rina Zaizov Pediatric Hematology and Oncology Division Schneider Children’s Medical Center of Israel, Petach Tikva, Israel. sizraeli@gmail.com. 18 Department of Systems Biology, City of Hope Comprehensive Cancer Center, Monrovia, CA, USA. sizraeli@gmail.com. # Contributed equally
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